S4TE 2.0 (Searching Algorithm for Type IV Effector proteins) is a software package developed for the prediction of Type IV effector proteins and the analysis of their genomic context. Different programs are implemented for prediction analyses and to compile results. S4TE 2.0 also produces interactive user-friendly graphics that can be downloaded as publication-quality infographics and illustrations.
Citations: Noroy C, Lefrançois T, and Meyer DF (2019). Searching Algorithm for Type IV Effector proteins (S4TE) 2.0 : improved tools for type IV effector prediction, analysis and comparison in proteobacteria. PLOS Computational Biology,15(3) : e1006847, first published online March 25, 2019 https://doi.org/10.1371/journal.pcbi.1006847 Meyer DF, Noroy C, Moumène A, Raffaele S, Albina E, Vachiéry N. (2013). Searching algorithm for type IV secretion system effectors 1.0 : a tool for predicting type IV effectors and exploring their genomic context. Nucleic Acids Research, 41 (20) : 9218-9229, first published online August 13, 2013, doi:10.1093/nar/gkt718
Download S4TE 1.4 package S4TE1.4.zip